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SRX25688131: Ammospiza maritima maritima PacBio HiFi sequencing
1 PACBIO_SMRT (Sequel II) run: 411,189 spots, 5.2G bases, 3Gb downloads

Design: SAGE blue pippin
Submitted by: G10K
Study: Ammospiza maritima maritima (seaside sparrow) genome, bAmmMar1, sequence data
show Abstracthide Abstract
The seaside sparrow (Ammospiza maritima) is a species of American sparrow. Their breeding habitat is salt marshes on the Atlantic and Gulf coasts of the United States from southern New Hampshire to southern Texas (from Wikipedia entry). This sample was collected by Chris Elphick from Barn Island Wildlife Management Area in Stonington, Connecticut, USA and used to generate a high-quality reference genome for the Vertebrate Genomes Project (VGP). The project was coordinated by Adrienne Kovach and Lindsey Fenderson of the University of New Hampshire. Sequencing and genome assembly were conducted at the Vertebrate Genomes Lab (VGL) at the Rockefeller University, led by Olivier Fedrigo and Erich D. Jarvis.
Sample: Animal sample from Ammospiza maritima maritima (seaside sparrow) for VGP reference genome, bAmmMai1
SAMN39181024 • SRS22328527 • All experiments • All runs
Library:
Name: bAmmMar1_PacBio_HiFi_bam_3
Instrument: Sequel II
Strategy: WGS
Source: GENOMIC
Selection: size fractionation
Layout: SINGLE
Runs: 1 run, 411,189 spots, 5.2G bases, 3Gb
Run# of Spots# of BasesSizePublished
SRR30225603411,1895.2G3Gb2024-08-13

ID:
34710523

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